> See also:
> - [[DNA Replication]]
> - [[Restriction Enzymes]]
> - [[Cloning and Expression Vectors]]
# Recombinant DNA Technology
Creation of **recombinant DNA** involves combining sequences that aren’t normally found together (e.g. human + bacterial DNA), and is the primary tool for the **genetic engineering** of organisms
**Plasmids** are circular pieces of double stranded DNA (dsDNA) that naturally occur in bacterial cells.
The significantly smaller size of plasmids compared the eukaryotic chromosomes makes them easier to edit/manipulate. Plasmids also lack any condensed state
### DNA Ligation
> See also
> - [[Nucleic Acids]]
It’s important to remember that *the bonds between two strands of DNA are not covalent*.
They are primarily held together by *hydrogen bonds* (a type of [[Intermolecular Forces|intermolecular force]]) between *complementary nucleotides*.
Special enzymes such as **DNA Ligase** are able to covalently join two separate strands together by creating a *phosphodiester* bond between the *3’ hydroxyl group* of one strand and the *5’ phosphate group* of another.
- These are often ATP dependent reactions. Many buffers used in ligation protocols will contain ATP to compensate.
Without a ligating agent, the complementary sticky ends would simply [[DNA Hybridization|hybridize]] together rather than become permanently integrated into the strand.
## Methods of Genetic Engineering
> See also:
> - [[CRISPR]]
### Site-Specific Recombinase
> See also:
> - [[Cre-Lox Recombination]]
- [ ] Recombinase enzymes
### Site-Specific Recombinase
> See also:
> - [[Cre-Lox Recombination]]
- [ ] Recombinase enzymes
### Viral Vectors
- Lentivirus
- Retrovirus